ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P56123_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P56123_F1_nD2

P56123_F1_nD2

UID: 003839200

AlphaFold

Range: 106-185
AlphaFold: AF-P56123
UniProt: P56123 (all domains)
Gene: rnr

Protein: Ribonuclease R (RNase R) (EC 3.1.13.1) (VacB protein homolog)

3D Structure

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Related Domains

Browse other domains in OB_RNR_2nd →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyOB_RNR_2nd(2.1.1.281)

Pfam Families

PF24190OB_RNR_2nd

Ribonuclease R second OB domain

ClanCL0021OB

External Links

AlphaFold DB: P56123 UniProt: P56123

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 106-185