ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

O25643_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O25643_F1_nD1

O25643_F1_nD1

UID: 003839209

AlphaFold

Range: 6-155
AlphaFold: AF-O25643
UniProt: O25643 (all domains)
Gene: HP_0995

Protein: Integrase/recombinase (XerD)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Phage_int_SAM_6 →

Classification

AArchitecturealpha arrays(a.6)

XX-grouplambda integrase-N-like(186)

HH-grouplambda integrase-N(186.1)

TT-grouplambda integrase-N(186.1.1)

FFamilyPhage_int_SAM_6(186.1.1.6)

Pfam Families

PF18644Phage_int_SAM_6

Phage integrase SAM-like domain

ClanCL0469l-integrase_N

External Links

AlphaFold DB: O25643 UniProt: O25643

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-155