ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P56123_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/P56123_F1_nD3

P56123_F1_nD3

UID: 003839220

AlphaFold

Range: 186-575
AlphaFold: AF-P56123
UniProt: P56123 (all domains)
Gene: rnr

Protein: Ribonuclease R (RNase R) (EC 3.1.13.1) (VacB protein homolog)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNB →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupRNB domain-like(2.9)

TT-groupRNB domain-like(2.9.1)

FFamilyRNB(2.9.1.1)

Pfam Families

RNB domain

ClanCL0021OB

External Links

AlphaFold DB: P56123 UniProt: P56123

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 186-575