ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O25242_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O25242_F1_nD2

O25242_F1_nD2

UID: 003839477

AlphaFold

Range: 121-245
AlphaFold: AF-O25242
UniProt: O25242 (all domains)
Gene: dnaN

Protein: Beta sliding clamp (Beta clamp) (Sliding clamp) (Beta-clamp processivity factor) (DNA polymerase III beta sliding clamp subunit) (DNA polymerase III subunit beta)

3D Structure

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Related Domains

Browse other domains in DNA_pol3_beta_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDNA clamp(227)

HH-groupDNA clamp(227.1)

TT-groupDNA clamp(227.1.1)

FFamilyDNA_pol3_beta_2(227.1.1.7)

Pfam Families

PF02767DNA_pol3_beta_2

DNA polymerase III beta subunit, central domain

ClanCL0060DNA_clamp

External Links

AlphaFold DB: O25242 UniProt: O25242

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 121-245