ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P55980_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P55980_F1_nD1

P55980_F1_nD1

UID: 003839511

AlphaFold

Range: 26-220
AlphaFold: AF-P55980
UniProt: P55980 (all domains)
Gene: cagA

Protein: Cytotoxicity-associated immunodominant antigen (120 kDa protein) (CAG pathogenicity island protein 26)

3D Structure

Loading viewer...

Related Domains

Browse other domains in CagA_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupOncogenic effector CagA N-terminal domain(3592)

HH-groupOncogenic effector CagA N-terminal domain(3592.1)

TT-groupOncogenic effector CagA N-terminal domain(3592.1.1)

FFamilyCagA_N(3592.1.1.1)

Pfam Families

CagA protein

External Links

AlphaFold DB: P55980 UniProt: P55980

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-220