ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q48252_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q48252_F1_nD4

Q48252_F1_nD4

UID: 003839711

AlphaFold

Range: 166-275,301-430,471-980
AlphaFold: AF-Q48252
UniProt: Q48252 (all domains)
Gene: cagE

Protein: Type IV secretion system protein CagE (EC 7.4.2.8) (CAG pathogenicity island protein 23) (Protein PicB)

3D Structure

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Related Domains

Browse other domains in P-loop_TraG →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyP-loop_TraG(2004.1.1.221)

Pfam Families

PF19044P-loop_TraG

TraG P-loop domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q48252 UniProt: Q48252

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 166-275,301-430,471-980