ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8BFW4_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q8BFW4_F1_nD4

Q8BFW4_F1_nD4

UID: 003840384

AlphaFold

Range: 321-520
AlphaFold: AF-Q8BFW4
UniProt: Q8BFW4 (all domains)
Gene: Trim65

Protein: E3 ubiquitin-protein ligase TRIM65 (EC 2.3.2.27) (Tripartite motif-containing protein 65)

3D Structure

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Related Domains

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Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilySPRY(10.1.1.8)

Pfam Families

SPRY domain

ClanCL0004Concanavalin

External Links

AlphaFold DB: Q8BFW4 UniProt: Q8BFW4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 321-520