ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8VC34_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8VC34_F1_nD1

Q8VC34_F1_nD1

UID: 003840584

AlphaFold

Range: 31-195
AlphaFold: AF-Q8VC34
UniProt: Q8VC34 (all domains)
Gene: Rpap2

Protein: Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2 (EC 3.1.3.16) (RNA polymerase II-associated protein 2)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RPAP2_Rtr1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRegulator of transcription protein Rtr1(3371)

HH-groupRegulator of transcription protein Rtr1(3371.1)

TT-groupRegulator of transcription protein Rtr1(3371.1.1)

FFamilyRPAP2_Rtr1(3371.1.1.1)

Pfam Families

PF04181RPAP2_Rtr1

Rtr1/RPAP2 family

External Links

AlphaFold DB: Q8VC34 UniProt: Q8VC34

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 31-195