ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O88632_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O88632_F1_nD2

O88632_F1_nD2

UID: 003840869

AlphaFold

Range: 546-600
AlphaFold: AF-O88632
UniProt: O88632 (all domains)
Gene: Sema3f

Protein: Semaphorin-3F (Semaphorin IV) (Sema IV)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTrefoil/Plexin domain-like(355)

HH-groupTrefoil/Plexin domain-like(355.1)

TT-groupTrefoil/Plexin domain-like(355.1.1)

FFamilyPSI(355.1.1.2)

Pfam Families

Plexin repeat

ClanCL0630PSI

External Links

AlphaFold DB: O88632 UniProt: O88632

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 546-600