ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8VCB1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8VCB1_F1_nD2

Q8VCB1_F1_nD2

UID: 003843726

AlphaFold

Range: 296-390,546-673
AlphaFold: AF-Q8VCB1
UniProt: Q8VCB1 (all domains)
Gene: Ndc1

Protein: Nucleoporin NDC1 (Transmembrane protein 48)

3D Structure

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Related Domains

Browse other domains in Ndc1_Nup →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyNdc1_Nup(109.4.1.504)

Pfam Families

PF09531Ndc1_Nup

Nucleoporin protein Ndc1-Nup

External Links

AlphaFold DB: Q8VCB1 UniProt: Q8VCB1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 296-390,546-673