ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q9DBY1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9DBY1_F1_nD2

Q9DBY1_F1_nD2

UID: 003845759

AlphaFold

Range: 66-275
AlphaFold: AF-Q9DBY1
UniProt: Q9DBY1 (all domains)
Gene: Syvn1

Protein: E3 ubiquitin-protein ligase synoviolin (EC 2.3.2.27) (RING-type E3 ubiquitin transferase synoviolin) (Synovial apoptosis inhibitor 1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TPR_SYVN1_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_SYVN1_N(109.4.1.1375)

Pfam Families

PF25563TPR_SYVN1_N

E3 ubiquitin-protein ligase synoviolin-like, TPR repeats

ClanCL0020TPR

External Links

AlphaFold DB: Q9DBY1 UniProt: Q9DBY1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-275