ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q80VD1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q80VD1_F1_nD1

Q80VD1_F1_nD1

UID: 003848697

AlphaFold

Range: 11-130
AlphaFold: AF-Q80VD1
UniProt: Q80VD1 (all domains)
Gene: Fam98b

Protein: tRNA-splicing ligase complex subunit FAM98B

3D Structure

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Related Domains

Browse other domains in DUF2465 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupCH domain-like(193)

HH-groupCalponin-homology domain-like(193.1)

TT-groupCalponin-homology domain-like(193.1.1)

FFamilyDUF2465(193.1.1.18)

Pfam Families

PF10239DUF2465

Protein of unknown function (DUF2465)

External Links

AlphaFold DB: Q80VD1 UniProt: Q80VD1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-130