ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9CU62_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q9CU62_F1_nD4

Q9CU62_F1_nD4

UID: 003849007

AlphaFold

Range: 1-250,901-1230
AlphaFold: AF-Q9CU62
UniProt: Q9CU62 (all domains)
Gene: Smc1a

Protein: Structural maintenance of chromosomes protein 1A (SMC protein 1A) (SMC-1-alpha) (SMC-1A) (Chromosome segregation protein SmcB) (Sb1.8)

3D Structure

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Related Domains

Browse other domains in SMC_N, AAA_21, AAA_29 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySMC_N, AAA_21, AAA_29(2004.1.1.480)

Pfam Families

RecF/RecN/SMC N terminal domain

ClanCL0023P-loop_NTPase

AAA domain, putative AbiEii toxin, Type IV TA system

ClanCL0023P-loop_NTPase

P-loop containing region of AAA domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q9CU62 UniProt: Q9CU62

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-250,901-1230