ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8VBV3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8VBV3_F1_nD1

Q8VBV3_F1_nD1

UID: 003849656

AlphaFold

Range: 26-75
AlphaFold: AF-Q8VBV3
UniProt: Q8VBV3 (all domains)
Gene: Exosc2

Protein: Exosome complex component RRP4 (Exosome component 2) (Ribosomal RNA-processing protein 4)

3D Structure

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Related Domains

Browse other domains in ECR1_N →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupRibosomal L27 protein(325.1.8)

FFamilyECR1_N(325.1.8.2)

Pfam Families

Exosome complex exonuclease RRP4 N-terminal region

ClanCL0105Hybrid

External Links

AlphaFold DB: Q8VBV3 UniProt: Q8VBV3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-75