ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P50404_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P50404_F1_nD1

P50404_F1_nD1

UID: 003849862

AlphaFold

Range: 226-374
AlphaFold: AF-P50404
UniProt: P50404 (all domains)
Gene: Sftpd

Protein: Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Lung surfactant protein D)

3D Structure

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Related Domains

Browse other domains in Lectin_C,Surfac_D-trimer →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-type lectin-like(209)

HH-groupC-type lectin-like(209.1)

TT-groupC-type lectin-like(209.1.1)

FFamilyLectin_C,Surfac_D-trimer(209.1.1.3)

Pfam Families

PF00059Lectin_C

Lectin C-type domain

ClanCL0056C_Lectin

PF09006Surfac_D-trimer

Lung surfactant protein D coiled-coil trimerisation

External Links

AlphaFold DB: P50404 UniProt: P50404

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 226-374