ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8VIK1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8VIK1_F1_nD1

Q8VIK1_F1_nD1

UID: 003850592

AlphaFold

Range: 11-120
AlphaFold: AF-Q8VIK1
UniProt: Q8VIK1 (all domains)
Gene: Snrnp25

Protein: U11/U12 small nuclear ribonucleoprotein 25 kDa protein (U11/U12 snRNP 25 kDa protein)

3D Structure

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Related Domains

Browse other domains in Ubiquitin_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUbiquitin_4(221.1.1.59)

Pfam Families

PF18036Ubiquitin_4

Ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q8VIK1 UniProt: Q8VIK1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-120