ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O54788_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O54788_F1_nD2

O54788_F1_nD2

UID: 003850865

AlphaFold

Range: 86-324
AlphaFold: AF-O54788
UniProt: O54788 (all domains)
Gene: Dffb

Protein: DNA fragmentation factor subunit beta (EC 3.-.-.-) (Caspase-activated deoxyribonuclease) (CAD) (Caspase-activated DNase) (DNA fragmentation factor 40 kDa subunit) (DFF-40)

3D Structure

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Related Domains

Browse other domains in DFF40 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupHis-Me finger endonucleases(378)

HH-groupHis-Me finger endonucleases(378.1)

TT-groupHis-Me finger endonucleases(378.1.1)

FFamilyDFF40(378.1.1.8)

Pfam Families

DNA fragmentation factor 40 kDa

ClanCL0263His-Me_finger

External Links

AlphaFold DB: O54788 UniProt: O54788

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-324