ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P23979_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P23979_F1_nD2

P23979_F1_nD2

UID: 003851057

AlphaFold

Range: 246-360,416-485
AlphaFold: AF-P23979
UniProt: P23979 (all domains)
Gene: Htr3a

Protein: 5-hydroxytryptamine receptor 3A (5-HT3-A) (5-HT3A) (5-hydroxytryptamine receptor 3) (5-HT-3) (5-HT3R) (Serotonin receptor 3A) (Serotonin-gated ion channel receptor)

3D Structure

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Related Domains

Browse other domains in Neur_chan_memb →

Classification

AArchitecturealpha bundles(a.7)

XX-groupNeurotransmitter-gated ion-channel transmembrane pore(5057)

HH-groupNeurotransmitter-gated ion-channel transmembrane pore(5057.1)

TT-groupNeurotransmitter-gated ion-channel transmembrane pore(5057.1.1)

FFamilyNeur_chan_memb(5057.1.1.1)

Pfam Families

PF02932Neur_chan_memb

Neurotransmitter-gated ion-channel transmembrane region

ClanCL0975NLGIC_TM

External Links

AlphaFold DB: P23979 UniProt: P23979

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 246-360,416-485