ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O54788_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O54788_F1_nD1

O54788_F1_nD1

UID: 003851544

AlphaFold

Range: 6-85
AlphaFold: AF-O54788
UniProt: O54788 (all domains)
Gene: Dffb

Protein: DNA fragmentation factor subunit beta (EC 3.-.-.-) (Caspase-activated deoxyribonuclease) (CAD) (Caspase-activated DNase) (DNA fragmentation factor 40 kDa subunit) (DFF-40)

3D Structure

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Related Domains

Browse other domains in CIDE-N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyCIDE-N(221.1.1.10)

Pfam Families

CIDE-N domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: O54788 UniProt: O54788

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-85