ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5DTT4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5DTT4_F1_nD2

Q5DTT4_F1_nD2

UID: 003853328

AlphaFold

Range: 161-235
UniProt: Q5DTT4 (all domains)
Gene: Rtl5

Protein: Retrotransposon Gag-like protein 5 (Retrotransposon gag domain-containing protein 4)

3D Structure

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Related Domains

Browse other domains in DUF4939 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyDUF4939(170.2.1.7)

Pfam Families

PF16297RTL1-8_LDOC

RTL1/3-8/LDOC, capsid-like domain

ClanCL0523GAG-polyprotein

External Links

UniProt: Q5DTT4

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