ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9EPL6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9EPL6_F1_nD1

Q9EPL6_F1_nD1

UID: 003854243

AlphaFold

Range: 21-95
AlphaFold: AF-Q9EPL6
UniProt: Q9EPL6 (all domains)
Gene: Mmp1b

Protein: Interstitial collagenase B (EC 3.4.24.7) (Matrix metalloproteinase-1b) (MMP-1b) (Mcol-B)

3D Structure

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Related Domains

Browse other domains in PG_binding_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupPGBD-like(144)

HH-groupPGBD-like(144.1)

TT-groupPGBD-like(144.1.1)

FFamilyPG_binding_1(144.1.1.1)

Pfam Families

PF01471PG_binding_1

Putative peptidoglycan binding domain

ClanCL0244PGBD

External Links

AlphaFold DB: Q9EPL6 UniProt: Q9EPL6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-95