ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9JM99_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9JM99_F1_nD2

Q9JM99_F1_nD2

UID: 003855214

AlphaFold

Range: 66-105
AlphaFold: AF-Q9JM99
UniProt: Q9JM99 (all domains)
Gene: Prg4

Protein: Proteoglycan 4 (Lubricin) (Megakaryocyte-stimulating factor) (Superficial zone proteoglycan) [Cleaved into: Proteoglycan 4 C-terminal part]

3D Structure

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Related Domains

Browse other domains in Somatomedin_B →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupSomatomedin B domain(920)

HH-groupSomatomedin B domain(920.1)

TT-groupSomatomedin B domain(920.1.1)

FFamilySomatomedin_B(920.1.1.1)

Pfam Families

PF01033Somatomedin_B

Somatomedin B domain

External Links

AlphaFold DB: Q9JM99 UniProt: Q9JM99

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-105