ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5KU39_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5KU39_F1_nD3

Q5KU39_F1_nD3

UID: 003856960

AlphaFold

Range: 781-840
AlphaFold: AF-Q5KU39
UniProt: Q5KU39 (all domains)
Gene: Vps41

Protein: Vacuolar protein sorting-associated protein 41 homolog (VAM2 homolog) (mVAM2)

3D Structure

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Related Domains

Browse other domains in zf-RING_Vps41 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyzf-RING_Vps41(376.1.3.69)

Pfam Families

PF23555zf-RING_Vps41

Vps41 C-terminal RING finger domain

ClanCL0229RING

External Links

AlphaFold DB: Q5KU39 UniProt: Q5KU39

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 781-840