ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5KU39_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5KU39_F1_nD2

Q5KU39_F1_nD2

UID: 003856961

AlphaFold

Range: 366-765
AlphaFold: AF-Q5KU39
UniProt: Q5KU39 (all domains)
Gene: Vps41

Protein: Vacuolar protein sorting-associated protein 41 homolog (VAM2 homolog) (mVAM2)

3D Structure

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Related Domains

Browse other domains in TPR_Vps41 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_Vps41(109.4.1.958)

Pfam Families

PF23556TPR_Vps41

Vps41 TPR-like region

ClanCL0020TPR

External Links

AlphaFold DB: Q5KU39 UniProt: Q5KU39

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 366-765