ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q04891_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q04891_F1_nD2

Q04891_F1_nD2

UID: 003857088

AlphaFold

Range: 411-490
AlphaFold: AF-Q04891
UniProt: Q04891 (all domains)
Gene: Sox13

Protein: Transcription factor SOX-13 (SRY (Sex determining region Y)-box 13) (mSox13)

3D Structure

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Related Domains

Browse other domains in HMG_box →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHMG-box-like(190)

HH-groupHMG-box(190.1)

TT-groupHMG-box(190.1.1)

FFamilyHMG_box(190.1.1.1)

Pfam Families

PF00505HMG_box

HMG (high mobility group) box

ClanCL0114HMG-box

External Links

AlphaFold DB: Q04891 UniProt: Q04891

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 411-490