ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O08688_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O08688_F1_nD1

O08688_F1_nD1

UID: 003857904

AlphaFold

Range: 6-345
AlphaFold: AF-O08688
UniProt: O08688 (all domains)
Gene: Capn5

Protein: Calpain-5 (EC 3.4.22.-) (New calpain 3) (nCL-3)

3D Structure

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Related Domains

Browse other domains in Peptidase_C2 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C2(219.1.1.4)

Pfam Families

PF00648Peptidase_C2

Calpain family cysteine protease

ClanCL0125Peptidase_CA

External Links

AlphaFold DB: O08688 UniProt: O08688

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-345