ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O54951_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O54951_F1_nD2

O54951_F1_nD2

UID: 003861156

AlphaFold

Range: 526-580
AlphaFold: AF-O54951
UniProt: O54951 (all domains)
Gene: Sema6b

Protein: Semaphorin-6B (Semaphorin VIB) (Sema VIB) (Semaphorin-N) (Sema N)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTrefoil/Plexin domain-like(355)

HH-groupTrefoil/Plexin domain-like(355.1)

TT-groupTrefoil/Plexin domain-like(355.1.1)

FFamilyPSI(355.1.1.2)

Pfam Families

Plexin repeat

ClanCL0630PSI

External Links

AlphaFold DB: O54951 UniProt: O54951

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 526-580