ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P28481_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P28481_F1_nD2

P28481_F1_nD2

UID: 003861834

AlphaFold

Range: 1271-1485
AlphaFold: AF-P28481
UniProt: P28481 (all domains)
Gene: Col2a1

Protein: Collagen alpha-1(II) chain (Alpha-1 type II collagen) [Cleaved into: Collagen alpha-1(II) chain; Chondrocalcin]

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-groupFibrinogen C-terminal domain-like(269)

HH-groupFibrinogen C-terminal domain-like(269.1)

TT-groupFibrinogen C-terminal domain-like(269.1.1)

FFamilyCOLFI(269.1.1.3)

Pfam Families

Fibrillar collagen C-terminal domain

ClanCL0422Fibrinogen_C

External Links

AlphaFold DB: P28481 UniProt: P28481

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1271-1485