ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8BJW7_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8BJW7_F1_nD2

Q8BJW7_F1_nD2

UID: 003862829

AlphaFold

Range: 466-565
AlphaFold: AF-Q8BJW7
UniProt: Q8BJW7 (all domains)
Gene: Eme1

Protein: Structure-specific endonuclease subunit EME1

3D Structure

Loading viewer...

Related Domains

Browse other domains in EME1-MUS81_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyEME1-MUS81_C(102.1.1.41)

Pfam Families

PF21292EME1-MUS81_C

EME1/MUS81, C-terminal

ClanCL0198HHH

External Links

AlphaFold DB: Q8BJW7 UniProt: Q8BJW7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 466-565