ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8VCA5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8VCA5_F1_nD1

Q8VCA5_F1_nD1

UID: 003863437

AlphaFold

Range: 51-90
AlphaFold: AF-Q8VCA5
UniProt: Q8VCA5 (all domains)
Gene: Tmprss4

Protein: Transmembrane protease serine 4 (EC 3.4.21.-) (Channel-activating protease 4) (mCAP2) [Cleaved into: Transmembrane protease serine 4 catalytic chain]

3D Structure

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Related Domains

Browse other domains in Ldl_recept_a →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupLDL receptor-like module(389.3)

TT-groupLDL receptor-like module(389.3.1)

FFamilyLdl_recept_a(389.3.1.1)

Pfam Families

PF00057Ldl_recept_a

Low-density lipoprotein receptor domain class A

External Links

AlphaFold DB: Q8VCA5 UniProt: Q8VCA5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 51-90