ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q921M3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q921M3_F1_nD1

Q921M3_F1_nD1

UID: 003863804

AlphaFold

Range: 6-440,771-1130
AlphaFold: AF-Q921M3
UniProt: Q921M3 (all domains)
Gene: Sf3b3

Protein: Splicing factor 3B subunit 3 (Pre-mRNA-splicing factor SF3b 130 kDa subunit) (SF3b130) (Spliceosome-associated protein 130) (SAP 130)

3D Structure

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Related Domains

Browse other domains in CPSF_A,MMS1_N →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyCPSF_A,MMS1_N(5.1.4.17)

Pfam Families

CPSF A subunit region

ClanCL0186Beta_propeller

PF10433Beta-prop_RSE1_1st

RSE1/DDB1/CPSF1 first beta-propeller

ClanCL0186Beta_propeller

External Links

AlphaFold DB: Q921M3 UniProt: Q921M3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-440,771-1130