ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P59438_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P59438_F1_nD2

P59438_F1_nD2

UID: 003864437

AlphaFold

Range: 606-650,721-865
AlphaFold: AF-P59438
UniProt: P59438 (all domains)
Gene: Hps5

Protein: BLOC-2 complex member HPS5 (Hermansky-Pudlak syndrome 5 protein homolog) (Ruby-eye protein 2) (Ru2)

3D Structure

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Related Domains

Browse other domains in TPR_HPS5 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_HPS5(109.4.1.885)

Pfam Families

PF23758TPR_HPS5

HPS5 TPR domain

ClanCL0020TPR

External Links

AlphaFold DB: P59438 UniProt: P59438

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 606-650,721-865