ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q3SYK4_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q3SYK4_F1_nD5

Q3SYK4_F1_nD5

UID: 003864535

AlphaFold

Range: 401-450
AlphaFold: AF-Q3SYK4
UniProt: Q3SYK4 (all domains)
Gene: Vrtn

Protein: Vertnin

3D Structure

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Related Domains

Browse other domains in Vertnin_mid →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyVertnin_mid(101.1.1.287)

Pfam Families

PF28388Vertnin_mid

Vertnin middle domain

External Links

AlphaFold DB: Q3SYK4 UniProt: Q3SYK4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 401-450