ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8CB27_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8CB27_F1_nD1

Q8CB27_F1_nD1

UID: 003864875

AlphaFold

Range: 41-120
AlphaFold: AF-Q8CB27
UniProt: Q8CB27 (all domains)
Gene: Yod1

Protein: Ubiquitin thioesterase OTU1 (EC 3.4.19.12)

3D Structure

Loading viewer...

Related Domains

Browse other domains in OTU1_UBXL →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyOTU1_UBXL(221.1.1.70)

Pfam Families

PF21403OTU1_UBXL

OTU1, UBXL domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q8CB27 UniProt: Q8CB27

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-120