ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6P4T2_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q6P4T2_F1_nD5

Q6P4T2_F1_nD5

UID: 003865560

AlphaFold

Range: 886-995
AlphaFold: AF-Q6P4T2
UniProt: Q6P4T2 (all domains)
Gene: Snrnp200

Protein: U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13) (BRR2 homolog) (U5 snRNP-specific 200 kDa protein) (U5-200KD)

3D Structure

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Related Domains

Browse other domains in SNRNP200_wHTH →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilySNRNP200_wHTH(101.1.2.392)

Pfam Families

PF23445WHD_SNRNP200

Winged Helix-turn-helix domain

ClanCL0123HTH

External Links

AlphaFold DB: Q6P4T2 UniProt: Q6P4T2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 886-995