ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8CGC4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8CGC4_F1_nD1

Q8CGC4_F1_nD1

UID: 003867267

AlphaFold

Range: 6-85
AlphaFold: AF-Q8CGC4
UniProt: Q8CGC4 (all domains)
Gene: Lsm14b

Protein: Protein LSM14 homolog B (RNA-associated protein 55B) (mRAP55B)

3D Structure

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Related Domains

Browse other domains in LSM14 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyLSM14(4.1.1.81)

Pfam Families

Scd6-like Sm domain

ClanCL0986Sm-like

External Links

AlphaFold DB: Q8CGC4 UniProt: Q8CGC4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-85