ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q56A04_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q56A04_F1_nD2

Q56A04_F1_nD2

UID: 003868783

AlphaFold

Range: 266-370
AlphaFold: AF-Q56A04
UniProt: Q56A04 (all domains)
Gene: Eme2

Protein: Structure-specific endonuclease subunit EME2

3D Structure

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Related Domains

Browse other domains in EME1-MUS81_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyEME1-MUS81_C(102.1.1.41)

Pfam Families

PF21292EME1-MUS81_C

EME1/MUS81, C-terminal

ClanCL0198HHH

External Links

AlphaFold DB: Q56A04 UniProt: Q56A04

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 266-370