ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6NS46_F1_nD15 - ECOD Domain | ECOD

ECOD/Domains/Q6NS46_F1_nD15

Q6NS46_F1_nD15

UID: 003870409

AlphaFold

Range: 1521-1540,1586-1855
AlphaFold: AF-Q6NS46
UniProt: Q6NS46 (all domains)
Gene: Pdcd11

Protein: Protein RRP5 homolog (Apoptosis-linked gene 4 protein) (Programmed cell death protein 11)

3D Structure

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Related Domains

Browse other domains in TPR_6, HAT_PRP39_N, HAT_PRP39_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_6, HAT_PRP39_N, HAT_PRP39_C(109.4.1.2292)

Pfam Families

Tetratricopeptide repeat

ClanCL0020TPR

PF23240HAT_PRP39_N

PRP39 N-terminal HAT repeat

ClanCL0020TPR

PF23241HAT_PRP39_C

PRP39 C-terminal HAT repeat

ClanCL0020TPR

External Links

AlphaFold DB: Q6NS46 UniProt: Q6NS46

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1521-1540,1586-1855