ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6ZPY2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q6ZPY2_F1_nD2

Q6ZPY2_F1_nD2

UID: 003871225

AlphaFold

Range: 856-1015
AlphaFold: AF-Q6ZPY2
UniProt: Q6ZPY2 (all domains)
Gene: Smg5

Protein: Nonsense-mediated mRNA decay factor SMG5 (EST1-like protein B) (LPTS-RP1) (LPTS-interacting protein) (SMG-5 homolog)

3D Structure

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Related Domains

Browse other domains in PIN_4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyPIN_4(2006.1.4.10)

Pfam Families

PIN domain

ClanCL0280PIN

External Links

AlphaFold DB: Q6ZPY2 UniProt: Q6ZPY2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 856-1015