ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O88509_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O88509_F1_nD2

O88509_F1_nD2

UID: 003871508

AlphaFold

Range: 421-475
AlphaFold: AF-O88509
UniProt: O88509 (all domains)
Gene: Dnmt3b

Protein: DNA (cytosine-5)-methyltransferase 3B (Dnmt3b) (EC 2.1.1.37) (DNA methyltransferase MmuIIIB) (DNA MTase MmuIIIB) (M.MmuIIIB)

3D Structure

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Related Domains

Browse other domains in ADD_DNMT3 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyADD_DNMT3(376.1.3.15)

Pfam Families

PF17980ADD_DNMT3

DNMT3, cysteine rich ADD domain, GATA1-like zinc finger

ClanCL0229RING

External Links

AlphaFold DB: O88509 UniProt: O88509

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 421-475