ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q99KR6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q99KR6_F1_nD1

Q99KR6_F1_nD1

UID: 003871553

AlphaFold

Range: 51-110
AlphaFold: AF-Q99KR6
UniProt: Q99KR6 (all domains)
Gene: Rnf34

Protein: E3 ubiquitin-protein ligase RNF34 (EC 2.3.2.27) (Phafin-1) (RING finger protein 34) (RING-type E3 ubiquitin transferase RNF34)

3D Structure

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Related Domains

Browse other domains in FYVE_CARP1-2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyFYVE_CARP1-2(376.1.3.21)

Pfam Families

PF21272FYVE_CARP1-2

E3 ubiquitin-protein ligase CARP1/2, FYVE/PHD zinc finger

ClanCL0229RING

External Links

AlphaFold DB: Q99KR6 UniProt: Q99KR6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 51-110