ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6P4T2_F1_nD8 - ECOD Domain | ECOD

ECOD/Domains/Q6P4T2_F1_nD8

Q6P4T2_F1_nD8

UID: 003872403

AlphaFold

Range: 1181-1290
AlphaFold: AF-Q6P4T2
UniProt: Q6P4T2 (all domains)
Gene: Snrnp200

Protein: U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13) (BRR2 homolog) (U5 snRNP-specific 200 kDa protein) (U5-200KD)

3D Structure

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Related Domains

Browse other domains in Sec63 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilySec63(11.1.1.45)

Pfam Families

Sec63 Brl domain

External Links

AlphaFold DB: Q6P4T2 UniProt: Q6P4T2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1181-1290