ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q9D6I0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9D6I0_F1_nD1

Q9D6I0_F1_nD1

UID: 003872909

AlphaFold

Range: 26-105
UniProt: Q9D6I0 (all domains)
Gene: Rtl8c

Protein: Cxx1c protein (Retrotransposon Gag like 8C)

3D Structure

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Related Domains

Browse other domains in DUF4939 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyDUF4939(170.2.1.7)

Pfam Families

PF16297RTL1-8_LDOC

RTL1/3-8/LDOC, capsid-like domain

ClanCL0523GAG-polyprotein

External Links

UniProt: Q9D6I0

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