ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8BGD7_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8BGD7_F1_nD1

Q8BGD7_F1_nD1

UID: 003873405

AlphaFold

Range: 1-55
AlphaFold: AF-Q8BGD7
UniProt: Q8BGD7 (all domains)
Gene: Npas4

Protein: Neuronal PAS domain-containing protein 4 (Neuronal PAS4) (HLH-PAS transcription factor NXF) (Limbic-enhanced PAS protein) (LE-PAS)

3D Structure

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Related Domains

Browse other domains in bHLH_NPAS4 →

Classification

AArchitecturealpha duplicates or obligate multimers(a.8)

XX-groupHLH-like(105)

HH-groupHLH, helix-loop-helix DNA-binding domain(105.1)

TT-groupHLH, helix-loop-helix DNA-binding domain(105.1.1)

FFamilybHLH_NPAS4(105.1.1.20)

Pfam Families

PF23183bHLH_NPAS4

NPAS4 bHLH domain

ClanCL0827bHLH

External Links

AlphaFold DB: Q8BGD7 UniProt: Q8BGD7

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-55