ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6PGF5_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q6PGF5_F1_nD4

Q6PGF5_F1_nD4

UID: 003874771

AlphaFold

Range: 921-1025,1131-1145
AlphaFold: AF-Q6PGF5
UniProt: Q6PGF5 (all domains)
Gene: Bms1

Protein: BMS1 homolog, ribosome assembly protein (Yeast) (BMS1, ribosome biogenesis factor)

3D Structure

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Related Domains

Browse other domains in RIBIOP_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAminomethyltransferase beta-barrel domain(1.1.8)

FFamilyRIBIOP_C(1.1.8.2)

Pfam Families

PF04950RIBIOP_C

40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal

ClanCL0866ALR_C-like

External Links

AlphaFold DB: Q6PGF5 UniProt: Q6PGF5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 921-1025,1131-1145