ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8R4U6_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q8R4U6_F1_nD5

Q8R4U6_F1_nD5

UID: 003875094

AlphaFold

Range: 416-465,541-593
AlphaFold: AF-Q8R4U6
UniProt: Q8R4U6 (all domains)
Gene: Top1mt

Protein: DNA topoisomerase I, mitochondrial (TOP1mt) (EC 5.6.2.1)

3D Structure

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Related Domains

Browse other domains in Topoisom_I,Topo_C_assoc →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupDNA breaking-rejoining enzymes(101.1.8)

FFamilyTopoisom_I,Topo_C_assoc(101.1.8.3)

Pfam Families

PF01028Topoisom_I

Eukaryotic DNA topoisomerase I, catalytic core

ClanCL0382DNA-mend

PF14370Topo_C_assoc

C-terminal topoisomerase domain

External Links

AlphaFold DB: Q8R4U6 UniProt: Q8R4U6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 416-465,541-593