ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F8VPZ5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F8VPZ5_F1_nD2

F8VPZ5_F1_nD2

UID: 003875902

AlphaFold

Range: 231-255,456-1020,1201-1230,1271-1300
AlphaFold: AF-F8VPZ5
UniProt: F8VPZ5 (all domains)
Gene: Ercc6

Protein: DNA excision repair protein ERCC-6 (EC 3.6.4.-) (ATP-dependent helicase ERCC6) (Cockayne syndrome protein CSB)

3D Structure

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Related Domains

Browse other domains in SNF2-rel_dom,Helicase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySNF2-rel_dom,Helicase_C(2004.1.1.24)

Pfam Families

PF00176SNF2-rel_dom

SNF2-related domain

ClanCL0023P-loop_NTPase

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: F8VPZ5 UniProt: F8VPZ5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 231-255,456-1020,1201-1230,1271-1300