ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A2ASQ1_F1_nD11 - ECOD Domain | ECOD

ECOD/Domains/A2ASQ1_F1_nD11

A2ASQ1_F1_nD11

UID: 003876158

AlphaFold

Range: 1011-1135
AlphaFold: AF-A2ASQ1
UniProt: A2ASQ1 (all domains)
Gene: Agrn

Protein: Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupSEA domain(304.47)

TT-groupSEA domain(304.47.1)

FFamilySEA(304.47.1.1)

Pfam Families

SEA domain

ClanCL0960HD_NOTCH-like

External Links

AlphaFold DB: A2ASQ1 UniProt: A2ASQ1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1011-1135