ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8VBV3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8VBV3_F1_nD2

Q8VBV3_F1_nD2

UID: 003877452

AlphaFold

Range: 76-165
AlphaFold: AF-Q8VBV3
UniProt: Q8VBV3 (all domains)
Gene: Exosc2

Protein: Exosome complex component RRP4 (Exosome component 2) (Ribosomal RNA-processing protein 4)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RRP4_S1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRRP4_S1(2.1.1.109)

Pfam Families

PF21266S1_RRP4

RRP4, S1 domain

ClanCL0021OB

External Links

AlphaFold DB: Q8VBV3 UniProt: Q8VBV3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 76-165