ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9YGX5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9YGX5_F1_nD1

Q9YGX5_F1_nD1

UID: 003878399

AlphaFold

Range: 291-410
AlphaFold: AF-Q9YGX5
UniProt: Q9YGX5 (all domains)
Gene: cpeb1

Protein: Cytoplasmic polyadenylation element-binding protein 1 (CPE-BP1) (CPE-binding protein 1) (CPEB-1) (Orb/CPEB-related RNA-binding protein) (Protein Zorba) (ZOR-1) (Zebrafish orb-type a)

3D Structure

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Related Domains

Browse other domains in RRM_7 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_7(304.9.1.25)

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

AlphaFold DB: Q9YGX5 UniProt: Q9YGX5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 291-410